Stem-loop gga-mir-6625

Accession

MI0022444

Description

Gallus gallus gga-mir-6625 precursor miRNA

Sequence

22 reads, 1 reads per million, 3 experiments

cuaacaucacggguagcuucuguccuUGGGGGAACUGGAAGCAAGAGUcaggagggaugcugauugcugguuucuaucuccccgcagcggcuggauugcagcaaucuccu
..............((((.((((.....(((((..(((((((.((((((((.(....).)))))).)).)))))))..))))))))).))))((((((...))))))...

Structure

----cuaacaucacgggu    u    ccuUG     AC       A  -      g g 
                  agcu cugu     GGGGA  UGGAAGC AG AGUcag a g
                  |||| ||||     |||||  ||||||| || |||||| |  
                  ucgg gacg     ccccu  aucuuug uc uuaguc u g
uccucuaacgacguuagg    c    -----     cu       g  g      g a 

Annotation confidence Not enough data

Genome context

chr10: 2314973-2315082 [-]

Mature gga-miR-6625-5p

• Accession: MIMAT0025721
• Description: Gallus gallus gga-miR-6625-5p mature miRNA
• Sequence: 27 - UGGGGGAACUGGAAGCAAGAGU - 48
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227