Stem-loop gga-mir-6622

Accession

MI0022537

Description

Gallus gallus gga-mir-6622 precursor miRNA

Sequence

agggcuggagggagacagcagccaaauuccauccagaggaagucccacugacugagaaaggcccagucUGUGGGGACAUUUCUGUGGCAUUuugaggguaaaauggcuaa
...((((........))))(((((...((((((((.((((((((((((.(((((.(......)))))).)).))))).))))).))).)).....))).....)))))..

Structure

agggcuggagggagacagc     --aau   -----  -   g     -     -  u     a aa 
                   agcca     ucc     au cca aggaa guccc ac gacug g  a
                   |||||     |||     || ||| ||||| ||||| || ||||| |   
                   ucggu     ggg     UA GGU UCUUU CAGGG UG cugac c  g
-----------------aa     aaaau   aguuU  C   G     A     G  U     - cg 

Annotation confidence Not enough data

Genome context

chr8: 22245941-22246050 [-]

Mature gga-miR-6622-3p

• Accession: MIMAT0025825
• Description: Gallus gallus gga-miR-6622-3p mature miRNA
• Sequence: 69 - UGUGGGGACAUUUCUGUGGCAUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227