Stem-loop gga-mir-6581

Accession

MI0022400

Description

Gallus gallus gga-mir-6581 precursor miRNA

Sequence

gaccccaucccgcugcagcgggagaguAGUGAGCUCAGAGGAGGACUGGGggaaagcagcccUGUCUCCCUGGUGGGCUUUUUgggaaguugaugcugagaa
...((((((((((....)))))).......(((((((.(((.((((.((((........)))))))).)))..)))))))..)))).(((....))).....

Structure

-------------gac    ucccgcugcagcgggagaguAGU       -G   A    U    gaa 
                ccca                       GAGCUCA  AGG GGAC GGGg   a
                ||||                       |||||||  ||| |||| ||||    
                gggU                       UUCGGGU  UCC UCUG Uccc   g
aagagucguaguugaa    ---------------------UU       GG   C    -    gac 

Annotation confidence Not enough data

Genome context

chr1: 48389947-48390048 [-]

Mature gga-miR-6581-5p

• Accession: MIMAT0025669
• Description: Gallus gallus gga-miR-6581-5p mature miRNA
• Sequence: 28 - AGUGAGCUCAGAGGAGGACUGGG - 50
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6581-3p

• Accession: MIMAT0025670
• Description: Gallus gallus gga-miR-6581-3p mature miRNA
• Sequence: 63 - UGUCUCCCUGGUGGGCUUUUU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227