Stem-loop gga-mir-6669

Accession

MI0022489

Description

Gallus gallus gga-mir-6669 precursor miRNA

Literature search

1 open access papers mention gga-mir-6669
(1 sentences)

Sequence

2492 reads, 2.0 reads per million, 191 experiments

agucucaucuccugggucugccgccuGGUGAUACGGGAGCAAGGCUGCAUacuugaaccuuaguucuuUGCAGCCUGGCCGUAUCUCAGgaugcuguccugcuagagg
........(((.((((.(.((..(((((.(((((((.....((((((((.....((((....))))..))))))))..))))))))))))..)).).))))...))).

Structure

agucucau   --c    u u  cg     U       GAGCA        Uacuu    c 
        cuc   uggg c gc  ccuGG GAUACGG     AGGCUGCA     gaac u
        |||   |||| | ||  ||||| |||||||     ||||||||     ||||  
        gag   gucc g cg  gGACU CUAUGCC     UCCGACGU     cuug u
-------g   auc    u u  ua     -       ---GG        ---uu    a 

Annotation confidence High

Genome context

Z: 28126937-28127044 [-]

Mature gga-miR-6669-5p

• Accession: MIMAT0025770
• Description: Gallus gallus gga-miR-6669-5p mature miRNA
• Sequence: 27 - GGUGAUACGGGAGCAAGGCUGCAU - 50
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6669-3p

• Accession: MIMAT0025771
• Description: Gallus gallus gga-miR-6669-3p mature miRNA
• Sequence: 69 - UGCAGCCUGGCCGUAUCUCAG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227