Stem-loop gga-mir-6684

Accession

MI0022505

Description

Gallus gallus gga-mir-6684 precursor miRNA

Sequence

cagaccagcaucugcucccUUUGCUGCACUGAAGAUGcagugaggugaccacccucagaugcucggcagggcaggcagcaaagcugcagcacaacacagguccccaucag
..(((((((....))).......((((.(((..((.(((.(((((.......)))))..)))))..))).))))(((((...)))))...........))))........

Structure

------ca    -------agcaucugcucccUUUG    A   AA  U   -g     ug 
        gacc                        CUGC CUG  GA Gca  ugagg  a
        ||||                        |||| |||  || |||  |||||  c
        cugg                        gacg gac  cu cgu  acucc  c
gacuaccc    acacaacacgacgucgaaacgacg    g   gg  -   ag     ca 

Annotation confidence Not enough data

Genome context

chr12: 11108224-11108333 [+]

Mature gga-miR-6684-5p

• Accession: MIMAT0025789
• Description: Gallus gallus gga-miR-6684-5p mature miRNA
• Sequence: 20 - UUUGCUGCACUGAAGAUG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227