Stem-loop gga-mir-6624

Accession

MI0022443

Description

Gallus gallus gga-mir-6624 precursor miRNA

Sequence

cccccccccccccaguguccccugcugcagaagcucccacugaggcaacacaggcagcacuggcUCCAGGGAAGGGCUUCUGUUUgcagaacacaacugcucugauuaca
..............((((...((((.((((((((((((.(((.(((....(((......)))))).)))))..))))))))))..)))).))))................

Structure

--ccccccccccccca    ccc    -u          --  a   a   aaca   gc 
                gugu   cugc  gcagaagcuc  cc cug ggc    cag  a
                ||||   ||||  ||||||||||  || ||| |||    |||   
                caca   gacg  UGUCUUCGGG  GG GAC Ucg    guc  g
acauuagucucgucaa    --a    UU          AA  -   C   ----   ac 

Annotation confidence Not enough data

Genome context

chr7: 16321986-16322095 [+]

Mature gga-miR-6624-3p

• Accession: MIMAT0025720
• Description: Gallus gallus gga-miR-6624-3p mature miRNA
• Sequence: 65 - UCCAGGGAAGGGCUUCUGUUU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227