Stem-loop gga-mir-6573

Accession

MI0022391

Description

Gallus gallus gga-mir-6573 precursor miRNA

Sequence

101 reads, 1.0 reads per million, 52 experiments

cUGUGCUGUGUGGGACUGUuggagaagugaggggcucucugugccguggaaaugcggugagcucuccaUCGGAGGCACUCUGACUUCUCGGacagggcugcacuggugguuaaugcuuu
....(((((((((..(((((.(((((((.((((((.(((((....(((((...((.....))..)))))))))))).)))).))))))).)))))..)))))).)))............

Structure

--------cUGU   -      GA     g       g    -  u     ugcc     aau  g 
            GCU GUGUGG  CUGUu gagaagu aggg gc cucug    gugga   gc g
            ||| ||||||  ||||| ||||||| |||| || |||||    |||||   || u
            ugg cacguc  gacaG CUCUUCA UCUC CG GAGGC    Uaccu   cg g
uuucguaauugg   u      gg     G       G    A  -     ----     -cu  a 

Annotation confidence Not enough data

Genome context

27: 1154137-1154255 [+]

Mature gga-miR-6573-5p

• Accession: MIMAT0025653
• Description: Gallus gallus gga-miR-6573-5p mature miRNA
• Sequence: 2 - UGUGCUGUGUGGGACUGU - 19
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6573-3p

• Accession: MIMAT0025654
• Description: Gallus gallus gga-miR-6573-3p mature miRNA
• Sequence: 69 - UCGGAGGCACUCUGACUUCUCGG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227