Stem-loop gga-mir-6597

Accession

MI0022417

Description

Gallus gallus gga-mir-6597 precursor miRNA

Sequence

2 reads, 0 reads per million, 2 experiments

gagagacgggagaacucaccucagccccggcgcccugcgcggggccggcuuguagcagugcugcCCUUCCCUGACGUAGAGGCCGGCCcggcagggguagaggcagccgc
......(((..(..((((((((.((((((((.(.((((((((((..((...(((((...)))))))..))))).))))).))))))...))).))))).))).)..))).

Structure

gagaga   ga aa   -     a   ---     g c     -     cc  cuu     a 
      cgg  g  cuc accuc gcc   ccggc c cugcg cgggg  gg   guagc  
      |||  |  ||| ||||| |||   ||||| | ||||| |||||  ||   ||||| g
      gcc  c  gag ugggg cgg   GGCCG G GAUGC GUCCC  CC   cgucg  
-----c   ga -g   a     a   cCC     - A     A     UU  ---     u 

Annotation confidence Not enough data

Genome context

chr20: 11097596-11097705 [-]

Mature gga-miR-6597-3p

• Accession: MIMAT0025692
• Description: Gallus gallus gga-miR-6597-3p mature miRNA
• Sequence: 65 - CCUUCCCUGACGUAGAGGCCGGCC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227