miRBase entry: gga-mir-6627

Stem-loop gga-mir-6627


Accession
MI0022446
Description
Gallus gallus gga-mir-6627 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
ucccaucuuggguuuuggggagcugcuuuucugccacauuucccucaggccugugguguuuggauugugGGAAUGAAGGUGAUGCUGUGGAugggcaccucugacaugau
.((((...))))...((.((((.(((((.(((((..((((.((.(((..((((((((......))))))))..))).)).))))..))))).))))).))))..))....

Structure
ucccaucuuggguuu  -g    c     u     ca    u  c   gg        gu 
               ug  ggag ugcuu ucugc  cauu cc uca  ccuguggu  u
               ||  |||| ||||| |||||  |||| || |||  ||||||||   
               ac  ucuc acggg AGGUG  GUAG GG AGU  GGguguua  u
-----------uagu  ag    c     u     UC    U  A   AA        gg 


Annotation confidence Not enough data
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Genome context
chr4: 90285196-90285305 [-]

Database links

Mature gga-miR-6627-3p

Accession MIMAT0025723
Description Gallus gallus gga-miR-6627-3p mature miRNA
Sequence 70 - GGAAUGAAGGUGAUGCUGUGGA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227