Stem-loop gga-mir-6698

Accession

MI0022519

Description

Gallus gallus gga-mir-6698 precursor miRNA

Sequence

367 reads, 1.0 reads per million, 129 experiments

aacggaagcgaacaauuccacaUUCUUCUCAGUAUCUUCCUCUGACcuggucucaaaguggUUAGGAGAGAGUGAGAAGUAAGUuggaguugccagaguuccaggaaaau
...((((.(...((((((((..(((((((((.(.((((...((((((............)))))))))).).))))))).))..))))))))...)..))))........

Structure

-----aac    -g gaa        ca  -       G A    CCU      ugguc 
        ggaa  c   caauucca  UU CUUCUCA U UCUU   CUGACc     u
        ||||  |   ||||||||  || ||||||| | ||||   ||||||      
        ccuu  g   guugaggu  AA GAAGAGU A AGAG   GAUUgg     c
uaaaagga    ga acc        UG  U       G G    ---      ugaaa 

Annotation confidence High

Genome context

2: 67530869-67530978 [+]

Mature gga-miR-6698-5p

• Accession: MIMAT0051304
• Description: Gallus gallus gga-miR-6698-5p mature miRNA
• Sequence: 23 - UUCUUCUCAGUAUCUUCCUCUGAC - 46
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6698-3p

• Accession: MIMAT0025805
• Description: Gallus gallus gga-miR-6698-3p mature miRNA
• Sequence: 62 - UUAGGAGAGAGUGAGAAGUAAGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227