Stem-loop gga-mir-6570

Accession

MI0022388

Description

Gallus gallus gga-mir-6570 precursor miRNA

Sequence

aaaacccugguuuggauuaAGGACCCACUGGAUCUGCAUCUUCcaaacuugggAGAGGAGAGCCUGUGGGCCAGAaaucccaccagcacugcaccaugcc
......(((((..(((((..((.(((((.((.(((.(.(((((((....)))))))).))).)).)))))))...))))).)))))....(((...))).

Structure

--------aaaacc     uu     -aA  A     U  A   G A       a 
              cuggu  ggauu   GG CCCAC GG UCU C UCUUCca a
              |||||  |||||   || ||||| || ||| | |||||||  
              gacca  ccuaa   CC GGGUG CC AGA G AGAgggu c
ccguaccacgucac     -c     AGA  -     U  G   G -       u 

Annotation confidence Not enough data

Genome context

chr1: 185065707-185065806 [+]

Mature gga-miR-6570-5p

• Accession: MIMAT0025647
• Description: Gallus gallus gga-miR-6570-5p mature miRNA
• Sequence: 20 - AGGACCCACUGGAUCUGCAUCUUC - 43
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6570-3p

• Accession: MIMAT0025648
• Description: Gallus gallus gga-miR-6570-3p mature miRNA
• Sequence: 54 - AGAGGAGAGCCUGUGGGCCAGA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227