Stem-loop gga-mir-6709

Accession

MI0022531

Description

Gallus gallus gga-mir-6709 precursor miRNA

Sequence

4 reads, 1 reads per million, 3 experiments

cugagcgguuccucugaccagaggcAGCCCGGCUGCUAACAAUGAGGAGAuggcguguuguuuucccucgugguucugcagggcugcuuuugcgauccgcgcucagcuca
((((((((((.....))))(((((((((((.((....(((.((((((.((.(((.....))).)))))))).)))..)).)))))))))))(((...)))))))))....

Structure

----      gguuccucugacc           G  UGCU   A      A  u   g 
    cugagc             agaggcAGCCC GC    AAC AUGAGG GA ggc u
    ||||||             ||||||||||| ||    ||| |||||| || ||| g
    gacucg             uuuucgucggg cg    uug ugcucc cu uug u
acuc      ----cgccuagcg           a  --uc   g      -  u   u 

Annotation confidence Not enough data

Genome context

chr11: 615293-615402 [-]

Mature gga-miR-6709-5p

• Accession: MIMAT0025819
• Description: Gallus gallus gga-miR-6709-5p mature miRNA
• Sequence: 26 - AGCCCGGCUGCUAACAAUGAGGAGA - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227