Stem-loop gga-mir-6564

Accession

MI0022381

Description

Gallus gallus gga-mir-6564 precursor miRNA

Sequence

7 reads, 0 reads per million, 2 experiments

caugcuauuuccugcuggaaagccuCGCCGUGCUUUCUCCCGCCGUcugccauuucaUGGACGGAGGAAGCGCGGGCAGgcugcugguagaggugcag
..(((.(((((.((((((..(((((..(((((((((((((..((((..........))))..)))))))))))))..))))).)))))))))))))).

Structure

ca   u     c      aa     CG             CG    cugc 
  ugc auuuc ugcugg  agccu  CCGUGCUUUCUCC  CCGU    c
  ||| ||||| ||||||  |||||  |||||||||||||  ||||     
  acg uggag augguc  ucgGA  GGCGCGAAGGAGG  GGUa    a
-g   -     -      -g     CG             CA    cuuu 

Annotation confidence Not enough data

Genome context

chr20: 11146403-11146500 [-]

Mature gga-miR-6564-5p

• Accession: MIMAT0025633
• Description: Gallus gallus gga-miR-6564-5p mature miRNA
• Sequence: 26 - CGCCGUGCUUUCUCCCGCCGU - 46
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6564-3p

• Accession: MIMAT0025634
• Description: Gallus gallus gga-miR-6564-3p mature miRNA
• Sequence: 58 - UGGACGGAGGAAGCGCGGGCAG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227