miRBase entry: gga-mir-6571

Stem-loop gga-mir-6571


Accession
MI0022389
Description
Gallus gallus gga-mir-6571 precursor miRNA


Sequence

ucauuuguuggcuugagguuGUAAAGCUGUUUGGAUCUUCAGggaaauuggcaacacUGAGAGACCACAUACAGCUUUGAAAaccuaauugcugaaauauucugcc
.......(((((...(((((.(((((((((.(((.(((((((..............)))).))))))...)))))))))..)))))....)))))...........

Structure
----ucauuug     -uug     -G         --U   A   -    ggaaau 
           uuggc    agguu  UAAAGCUGU   UGG UCU UCAG      u
           |||||    |||||  |||||||||   ||| ||| ||||       
           agucg    uccaA  GUUUCGACA   ACC AGA AGUc      g
ccgucuuauaa     uuaa     AA         UAC   -   G    acaacg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 64574423-64574528 [+]

Database links

Mature gga-miR-6571-5p

Accession MIMAT0025649
Description Gallus gallus gga-miR-6571-5p mature miRNA
Sequence 21 - GUAAAGCUGUUUGGAUCUUCAG - 42
Evidence experimental
Illumina [1]

Mature gga-miR-6571-3p

Accession MIMAT0025650
Description Gallus gallus gga-miR-6571-3p mature miRNA
Sequence 58 - UGAGAGACCACAUACAGCUUUGAAA - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227