Stem-loop gga-mir-6699

Accession

MI0022521

Description

Gallus gallus gga-mir-6699 precursor miRNA

Sequence

211 reads, 2.0 reads per million, 78 experiments

agcaagcauuggcacucuccucuugUGAAGACCUCGUGCAUUGUAGCUuugcaugcuacaauacacuagaucuuagucaaaaggaaAGCCAAGGCACAGAUGGAagugaa
.....((.(((((....((((.(((..((((.((.(((.((((((((.......)))))))).))).)).))))...))).))))..))))).))...............

Structure

----------agcaa  a     acuc    c   -UG    C  C   C        Uu 
               gc uuggc    uccu uug   AAGA CU GUG AUUGUAGC  u
               || |||||    |||| |||   |||| || ||| ||||||||  g
               CG AACCG    agga aac   uucu ga cac uaacaucg  c
aagugaAGGUAGACA  G     --Aa    a   uga    a  u   a        ua 

Annotation confidence Low

Genome context

3: 67140726-67140835 [-]

Mature gga-miR-6699-5p

• Accession: MIMAT0025808
• Description: Gallus gallus gga-miR-6699-5p mature miRNA
• Sequence: 26 - UGAAGACCUCGUGCAUUGUAGCU - 48
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6699-3p

• Accession: MIMAT0051305
• Description: Gallus gallus gga-miR-6699-3p mature miRNA
• Sequence: 87 - AGCCAAGGCACAGAUGGA - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227