Stem-loop gga-mir-6672

Accession

MI0022492

Description

Gallus gallus gga-mir-6672 precursor miRNA

Sequence

258 reads, 2.0 reads per million, 47 experiments

gugaggacUGAGUCAGAGAUUGGCAUcccuuuucaguggugcccagugccaggacaaggggcagUGGGCACAAACUGGAAGACaggcggcuuugucugaacaccaggcag
.......(((..(((((.(..(((..((.((((((((.(((((((.((((.........)))).)))))))..))))))))...))..))).).)))))....)))....

Structure

gugagga   --AG     G UU   AU  --c        -g       g    agg 
       cUG    UCAGA A  GGC  cc   uuuucagu  gugccca ugcc   a
       |||    ||||| |  |||  ||   ||||||||  ||||||| ||||   c
       gac    agucu u  ucg  gg   GAAGGUCA  CACGGGU acgg   a
---gacg   caca     g -u   gc  aCA        AA       g    gga 

Annotation confidence Not enough data

Genome context

1: 112728295-112728404 [+]

Mature gga-miR-6672-5p

• Accession: MIMAT0051299
• Description: Gallus gallus gga-miR-6672-5p mature miRNA
• Sequence: 9 - UGAGUCAGAGAUUGGCAU - 26
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6672-3p

• Accession: MIMAT0025774
• Description: Gallus gallus gga-miR-6672-3p mature miRNA
• Sequence: 65 - UGGGCACAAACUGGAAGAC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227