miRBase entry: gga-mir-6687

Stem-loop gga-mir-6687


Accession
MI0022508
Description
Gallus gallus gga-mir-6687 precursor miRNA


Sequence

21 reads, 1 reads per million, 3 experiments
ggagcggcggggaggggcggggcugaggagcagagccccgcggcggccggaucgggcgggagucacgAGCGACUGCCGGGAGGGGCUCGCcgcccccaggccggacggca
.(..((((((((.(((((...(((....)))...)))))(((((((((...((.(((((..((.....))..))))).))...))).))))))))))..))))..)....

Structure
---g ag    --    aggggcggggcugaggagcagagcccc      -   gga  g     ga  c 
    g  cggc  gggg                           gcggcg gcc   uc ggcgg  gu a
    |  ||||  ||||                           |||||| |||   || |||||  || c
    c  gccg  cccc                           cgcCGC CGG   GG CCGUC  CG g
acgg ag    ga    ---------------------------      U   GGA  G     AG  A 


Annotation confidence Not enough data
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Genome context
chr3: 81786488-81786597 [-]

Database links

Mature gga-miR-6687-3p

Accession MIMAT0025793
Description Gallus gallus gga-miR-6687-3p mature miRNA
Sequence 68 - AGCGACUGCCGGGAGGGGCUCGC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227