Stem-loop gga-mir-6706

Accession

MI0022528

Description

Gallus gallus gga-mir-6706 precursor miRNA

Sequence

109 reads, 1.0 reads per million, 66 experiments

cuuucacuggaacagggcagcuaggAGGAGAAAUGGAGUGGGCUGAGUUuucucucUGUCUCUCUGCUUCUCCAGUaucacagcaaagugucauguuucaugcugcaaca
.......(((((((.(((((((..((((((((.(((((.((((.(((......))).))))))))).))))))....))..)))....)))).)))))))..........

Structure

---cuuucac       g    ----   ag  ----      A     U    U   UU 
          uggaaca ggca    gcu  gA    GGAGAA UGGAG GGGC GAG  u
          ||||||| ||||    |||  ||    |||||| ||||| |||| |||   
          acuuugu cugu    cga  cu    CCUCUU GUCUC UCUG cuc  u
acaacgucgu       a    gaaa   ca  aUGA      C     -    U   uc 

Annotation confidence Medium

Genome context

5: 23198974-23199083 [-]

Mature gga-miR-6706-5p

• Accession: MIMAT0025816
• Description: Gallus gallus gga-miR-6706-5p mature miRNA
• Sequence: 26 - AGGAGAAAUGGAGUGGGCUGAGUU - 49
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6706-3p

• Accession: MIMAT0051307
• Description: Gallus gallus gga-miR-6706-3p mature miRNA
• Sequence: 57 - UGUCUCUCUGCUUCUCCAGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227