Stem-loop gga-mir-6671

Accession

MI0022491

Description

Gallus gallus gga-mir-6671 precursor miRNA

Sequence

2 reads, 0 reads per million, 2 experiments

gcggaaggaaagcagcauugcagccUGUCCUGGAGUCUCGUGCACACgugcaaacacucaggugugcucaccacugcaggaacugcugcaagguuugcagaccagagcuc
((....((...(((((.(((((((...(((((.(((...(.((((((.((........)).)))))).)...))).)))))...))))))).).))))...))...))..

Structure

--  ggaa  aaa    - a       cUG     G   CUC U      g  caa 
  gc    gg   gcag c uugcagc   UCCUG AGU   G GCACAC ug   a
  ||    ||   |||| | |||||||   ||||| |||   | |||||| ||    
  cg    cc   cguu g aacgucg   aggac uca   c cgugug ac   c
cu  -aga  aga    u g       uca     g   cca u      g  uca 

Annotation confidence Not enough data

Genome context

chr24: 5039305-5039414 [+]

Mature gga-miR-6671-5p

• Accession: MIMAT0025773
• Description: Gallus gallus gga-miR-6671-5p mature miRNA
• Sequence: 26 - UGUCCUGGAGUCUCGUGCACAC - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227