Stem-loop gga-mir-6646-2

Accession

MI0023554

Description

Gallus gallus gga-mir-6646-2 precursor miRNA

Sequence

ugcagcccgcagcucagauucugccuuucucccagcugcugccaucaggacguugccagguUCUGGUGGUAGCAGCUGGAAGGaugcaggaagaucccaacaagggcugu
.(((((((........((((((((..((((.((((((((((((((((((((........)))))))))))))))))))).)))).))))...)))).......)))))))

Structure

u       gcagcuca    ---    cu    c                    guu 
 gcagccc        gauu   cugc  uucu ccagcugcugccaucaggac   g
 |||||||        ||||   ||||  |||| ||||||||||||||||||||    
 ugucggg        cuag   gacg  aGGA GGUCGACGAUGGUGGUCUug   c
-       -aacaacc    aag    -u    A                    gac 

Annotation confidence Not enough data

Genome context

Unknown

Mature gga-miR-6646-3p

• Accession: MIMAT0025743
• Description: Gallus gallus gga-miR-6646-3p mature miRNA
• Sequence: 62 - UCUGGUGGUAGCAGCUGGAAGG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227