Stem-loop gga-mir-6585

Accession

MI0022405

Description

Gallus gallus gga-mir-6585 precursor miRNA

Sequence

2 reads, 1 reads per million, 2 experiments

uacugaaaaugaagacaggAAUCAGAACGUGCUGUGAGCUacuuugcaugugagcuaccuguuuauuuugcuguagugaggagcuuauuuuggagcacguauugguucau
..(((..........)))(((((((.((((((((((((((.(((((((.((((((.....))))))..)))......))))))))))).....))))))).)))))))..

Structure

uacugaaaaugaagacag       A       -----       a    ------   -u      u 
                  gAAUCAG ACGUGCU     GUGAGCU cuuu      gca  gugagc a
                  ||||||| |||||||     ||||||| ||||      |||  |||||| c
                  cuugguu ugcacga     uauucga ggag      cgu  uauuug c
----------------ua       a       gguuu       -    ugaugu   uu      u 

Annotation confidence Not enough data

Genome context

chr19: 5039446-5039555 [+]

Mature gga-miR-6585-5p

• Accession: MIMAT0025676
• Description: Gallus gallus gga-miR-6585-5p mature miRNA
• Sequence: 20 - AAUCAGAACGUGCUGUGAGCU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227