Stem-loop gga-mir-6594

Accession

MI0022414

Description

Gallus gallus gga-mir-6594 precursor miRNA

Sequence

7 reads, 0 reads per million, 3 experiments

ucugcuuugcaccacaggguUGGGGGUGGCGUGAGUUGUGGcugggcuuuggugcccacucucagcucaugucaucccacagggugaugcacaggaggggcacuaugggg
(((.((.((((.(((...((..((((((((((((((((.((.(((((......))))).)).))))))))))))))))))...))).)))).)).)))............

Structure

------------   g  u    c   agg  UG                U  c     uu 
            ucu cu ugca cac   gu  GGGGUGGCGUGAGUUG GG ugggc  u
            ||| || |||| |||   ||  |||||||||||||||| || |||||   
            gga ga acgu gug   ca  cccuacuguacucgac cu acccg  g
gggguaucacgg   g  c    a   gga  --                u  c     ug 

Annotation confidence Not enough data

Genome context

chr4: 598336-598445 [+]

Mature gga-miR-6594-5p

• Accession: MIMAT0025688
• Description: Gallus gallus gga-miR-6594-5p mature miRNA
• Sequence: 21 - UGGGGGUGGCGUGAGUUGUGG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227