Stem-loop gga-mir-6696

Accession

MI0022517

Description

Gallus gallus gga-mir-6696 precursor miRNA

Literature search

1 open access papers mention gga-mir-6696
(1 sentences)

Sequence

175 reads, 0.0 reads per million, 67 experiments

ucauucugcugaagcgaguAGCUGUGAUCUCAAGCCCCCAcaggcagcucagagugGGAGACUUGCCUGAUAACAGCUGcaugcaaagcaagauugucugcau
.((.((((((...(((.((((((((.(((.(((((.(((((............))))).).))))...))).)))))))).)))..))).))).)).......

Structure

------u  u   -   gaa   a        G   --U    - C     aggca 
       ca ucu gcu   gcg guAGCUGU AUC   CAAG C CCCAc     g
       || ||| |||   ||| |||||||| |||   |||| | |||||      
       gu aga cga   cgu cGUCGACA UAG   GUUC G GGgug     c
uacgucu  u   a   -aa   a        A   UCC    A A     agacu 

Annotation confidence Medium

Genome context

17: 5366411-5366511 [+]

Mature gga-miR-6696-5p

• Accession: MIMAT0025802
• Description: Gallus gallus gga-miR-6696-5p mature miRNA
• Sequence: 20 - AGCUGUGAUCUCAAGCCCCCA - 40
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6696-3p

• Accession: MIMAT0025803
• Description: Gallus gallus gga-miR-6696-3p mature miRNA
• Sequence: 57 - GGAGACUUGCCUGAUAACAGCUG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227