Stem-loop gga-mir-6559

Accession

MI0022377

Description

Gallus gallus gga-mir-6559 precursor miRNA

Sequence

317 reads, 1.0 reads per million, 127 experiments

aaugugccuuaggaaagggaaugggUUGGGAGAAAGAGUCAUUACCUGacuucuuguuaucgggcuucAGAGUUGACUCUUCCUUGCAGUUcuuggcgagcagaacuua
....(.((((....)))).).......(.(((.((((((((..((((((...((((....))))..)))).)))))))))).))).)((((((.(.....)))))))..

Structure

aaugugccuuaggaaagggaaugggUU G   A        UU  -    cuu    u 
                           G GAG AAGAGUCA  AC CUGa   cuug u
                           | ||| ||||||||  || ||||   ||||  
                           C UUC UUCUCAGU  UG GAcu   gggc a
-----auucaagacgagcgguucUUGA G   C        --  A    -uc    u 

Annotation confidence High

Genome context

1: 133166352-133166460 [-]

Mature gga-miR-6559-5p

• Accession: MIMAT0025625
• Description: Gallus gallus gga-miR-6559-5p mature miRNA
• Sequence: 26 - UUGGGAGAAAGAGUCAUUACCUG - 48
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6559-3p

• Accession: MIMAT0025626
• Description: Gallus gallus gga-miR-6559-3p mature miRNA
• Sequence: 69 - AGAGUUGACUCUUCCUUGCAGUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227