Stem-loop gga-mir-6656

Accession

MI0022476

Description

Gallus gallus gga-mir-6656 precursor miRNA

Sequence

2 reads, 0 reads per million, 2 experiments

aaggcagccccagaggguggagggaUGCAGGGCGAGUAGAGAAAGGCAUcuuacaucuccucgguggcuugcucuggggcccgcauccuugugccuuccuuuaguuugcu
..((((((....(((((((.((((((((.((((...(((((.(((.((((............)))).))).)))))..)))))))))))).))))))).....).)))))

Structure

aa     - -ccca       g        A    GAG     A   G    uuaca 
  ggcag c     gagggug agggaUGC GGGC   UAGAG AAG CAUc     u
  ||||| |     ||||||| |||||||| ||||   ||||| ||| ||||      
  ucguu g     cuuccgu uuccuacg cccg   gucuc uuc gugg     c
--     u auuuc       g        -    -gg     g   g    cuccu 

Annotation confidence Not enough data

Genome context

chr1: 175931282-175931391 [-]

Mature gga-miR-6656-5p

• Accession: MIMAT0025757
• Description: Gallus gallus gga-miR-6656-5p mature miRNA
• Sequence: 26 - UGCAGGGCGAGUAGAGAAAGGCAU - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227