Stem-loop gga-mir-6551

Accession

MI0022369

Description

Gallus gallus gga-mir-6551 precursor miRNA

Sequence

ggugguuuuacuggggaggggagagCGGUGCAUCUCUGCAGCCCGCAugagccaugugcgggagugGGGCUGUGAGAGAUGUUCCCUUucccuucccucuugugccac
.(((((......(((((((((((((.((.(((((((((((((((.(((...((......))..)))))))))).)))))))).))))))))))))))).....)))))

Structure

g     uuuacu             C  U        -       G   gag  au 
 guggu      ggggaggggagag GG GCAUCUCU GCAGCCC CAu   cc  g
 |||||      ||||||||||||| || |||||||| ||||||| |||   ||   
 caccg      ucccuucccuUUC CC UGUAGAGA UGUCGGG gug   gg  u
-     -uguuc             -  U        G       -   -ag  cg 

Annotation confidence Not enough data

Genome context

chr18: 9400612-9400719 [-]

Mature gga-miR-6551-5p

• Accession: MIMAT0025609
• Description: Gallus gallus gga-miR-6551-5p mature miRNA
• Sequence: 26 - CGGUGCAUCUCUGCAGCCCGCA - 47
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6551-3p

• Accession: MIMAT0025610
• Description: Gallus gallus gga-miR-6551-3p mature miRNA
• Sequence: 67 - GGGCUGUGAGAGAUGUUCCCUU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227