Stem-loop gga-mir-6575

Accession

MI0022393

Description

Gallus gallus gga-mir-6575 precursor miRNA

Sequence

cucugcuaggcagaauccuuugguuUUGUCAGCUUGGGGAAGCUCUUuggagcguuuugaaaggcagGAGUUUUCCCAGGCUGAUGUCAcuagaagauuccuguagau
.(((((.(((...((((.((((((..(((((((((((((((((((((....((.((....)).)))))))))))))))))))))))..)))))).)))))))))))).

Structure

c     u   cag    c      uU                     ugga  g  u 
 ucugc agg   aauc uuuggu  UGUCAGCUUGGGGAAGCUCUU    gc uu u
 ||||| |||   |||| ||||||  |||||||||||||||||||||    || ||  
 agaug ucc   uuag agaucA  GUAGUCGGACCCUUUUGAGga    cg aa g
u     -   ---    a      CU                     ----  g  a 

Annotation confidence Not enough data

Genome context

chr10: 2623651-2623758 [-]

Mature gga-miR-6575-5p

• Accession: MIMAT0025657
• Description: Gallus gallus gga-miR-6575-5p mature miRNA
• Sequence: 26 - UUGUCAGCUUGGGGAAGCUCUU - 47
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6575-3p

• Accession: MIMAT0025658
• Description: Gallus gallus gga-miR-6575-3p mature miRNA
• Sequence: 68 - GAGUUUUCCCAGGCUGAUGUCA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227