Stem-loop gga-mir-6711

Accession

MI0022533

Description

Gallus gallus gga-mir-6711 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ugcaagauuuauuccuuucgugagcugCACUUGGGAUUGAGAAGAAGCAagagccugugauuuccuuuuucucgagucuaagauacaguaacagaaaggaaaagcugcuu
.(((.(.(((.((((((((((..((((..((((((.(((((((((((..(((........))).))))))))))).))))))...)))).)).)))))))))))))))..

Structure

-u   a a   a        -  ga    -CA      A           CA   gcc 
  gca g uuu uuccuuuc gu  gcug   CUUGGG UUGAGAAGAAG  aga   u
  ||| | ||| |||||||| ||  ||||   |||||| |||||||||||  |||    
  cgu c gaa aaggaaag ca  ugac   gaaucu agcucuuuuuc  uuu   g
uu   - -   -        a  -a    aua      g           -c   agu 

Annotation confidence Not enough data

Genome context

chr3: 10070501-10070610 [-]

Mature gga-miR-6711-5p

• Accession: MIMAT0025821
• Description: Gallus gallus gga-miR-6711-5p mature miRNA
• Sequence: 28 - CACUUGGGAUUGAGAAGAAGCA - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227