Stem-loop gga-mir-6565

Accession

MI0022382

Description

Gallus gallus gga-mir-6565 precursor miRNA

Sequence

12 reads, 1 reads per million, 4 experiments

cuagucuguauuccuuaaaAUGAGAUAGCAAAGCACACUUCaguguaugaauugaUCUGUGCUUGUGUACUCAUAGgcuuuuggacaccuggaagauguuu
...(((((.(..(((....(((((...((((.(((((..(((((......)))))..)))))))))...))))))))..).)))))...............

Structure

------------cua     u uu   uaaa     AUA    A     CU     gu 
               gucug a  ccu    AUGAG   GCAA GCACA  UCagu  a
               ||||| |  |||    |||||   |||| |||||  |||||   
               caggu u  gGA    UACUC   UGUU CGUGU  aguua  u
uuuguagaaggucca     u uc   ----     AUG    -     CU     ag 

Annotation confidence Not enough data

Genome context

chrZ: 55504493-55504593 [+]

Mature gga-miR-6565-5p

• Accession: MIMAT0025635
• Description: Gallus gallus gga-miR-6565-5p mature miRNA
• Sequence: 20 - AUGAGAUAGCAAAGCACACUUC - 41
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6565-3p

• Accession: MIMAT0025636
• Description: Gallus gallus gga-miR-6565-3p mature miRNA
• Sequence: 56 - UCUGUGCUUGUGUACUCAUAG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227