Stem-loop gga-mir-6583

Accession

MI0022402

Description

Gallus gallus gga-mir-6583 precursor miRNA

Literature search

1 open access papers mention gga-mir-6583
(1 sentences)

Sequence

22 reads, 0 reads per million, 4 experiments

accugggaaggugacaagcAGAGGAGCUGGGAGGAUGcagcgggagguaucucgcuuaauugcaccugacauuucucuuucauuucccaguguguaaugcauuucuuaau
((((((((((.(((.....(((((((.((..(((.((((((((((....)))))).....)))))))..))))))))).))))))))))).)).................

Structure

-----------------  -        g   caagc       C  GG   A    -----      g 
                 ac cugggaag uga     AGAGGAG UG  AGG UGca     gcggga g
                 || |||||||| |||     ||||||| ||  ||| ||||     ||||||  
                 ug gacccuuu acu     ucucuuu ac  ucc acgu     cgcucu u
uaauucuuuacguaaug  u        -   ----u       -  ag   -    uaauu      a 

Annotation confidence Not enough data

Genome context

chr3: 762580-762689 [+]

Mature gga-miR-6583-5p

• Accession: MIMAT0025673
• Description: Gallus gallus gga-miR-6583-5p mature miRNA
• Sequence: 20 - AGAGGAGCUGGGAGGAUG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227