miRBase entry: gga-mir-6651

Stem-loop gga-mir-6651


Accession
MI0022470
Description
Gallus gallus gga-mir-6651 precursor miRNA

Literature search
2 open access papers mention gga-mir-6651
(5 sentences)

Sequence

23 reads, 3 reads per million, 5 experiments
agccccggugagccgaggcacACCAGGUUGCCUAAGGAGGGGgugccagcccauggucagcuaacugguaccugcuccugguucuuggcgaggguacgccuccagacccg
.(((.(((....))).))).(.(((((..(((..(((((.(((((((((...............))))))))).)))))))).))))).).((((.(.......))))).

Structure
agccccggugagccgaggca A     UU   UA     G         cccaug 
                    c CCAGG  GCC  AGGAG GGgugccag      g
                    | |||||  |||  ||||| |||||||||      u
                    g gguuc  ugg  uccuc uccaugguc      c
gcccagaccuccgcauggga c     -u   --     g         aaucga 


Annotation confidence Not enough data
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Genome context
chrZ: 48684570-48684679 [+]

Database links

Mature gga-miR-6651-5p

Accession MIMAT0025751
Description Gallus gallus gga-miR-6651-5p mature miRNA
Sequence 22 - ACCAGGUUGCCUAAGGAGGGG - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227