Stem-loop mmu-mir-3547

Accession

MI0022813

Symbol

MGI: Mir3547

Description

Mus musculus mmu-mir-3547 precursor miRNA

Gene family

MIPF0001788; mir-3547

Sequence

620 reads, 20 reads per million, 33 experiments

GUGGGAAGAGGGGUGGGGCCCGGGAcuguacccaugugaggacuauucuugaguccugcucuuguucUGAGCACCACCCCUCUCUCAG
.(((((.(((((((((.((.((((((.........((.((((((.......))))))))....)))))).)).)))))))))))))).

Structure

G     A         G  C      uguacccau  g      au 
 UGGGA GAGGGGUGG GC CGGGAc         gu aggacu  u
 ||||| ||||||||| || ||||||         || ||||||  c
 ACUCU CUCCCCACC CG GUcuug         cg uccuga  u
G     -         A  A      -----uucu  -      gu 

Annotation confidence Not enough data

Genome context

chr17: 25245551-25245638 [-]

Mature mmu-miR-3547-5p

• Accession: MIMAT0027832
• Description: Mus musculus mmu-miR-3547-5p mature miRNA
• Sequence: 1 - GUGGGAAGAGGGGUGGGGCCCGGGA - 25
• Evidence: experimental ; meta-analysis [1]

Mature mmu-miR-3547-3p

• Accession: MIMAT0027833
• Description: Mus musculus mmu-miR-3547-3p mature miRNA
• Sequence: 68 - UGAGCACCACCCCUCUCUCAG - 88
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645