Stem-loop mmu-mir-7001

Accession

MI0022849

Symbol

MGI: Mir7001

Description

Mus musculus mmu-mir-7001 precursor miRNA

Literature search

1 open access papers mention mmu-mir-7001
(1 sentences)

Sequence

71 reads, 4 reads per million, 20 experiments

ggaggAGGCAGGGUGUGAGCGUGAGCAUcccagaggcccagguucaaguccagcccugaCGCUCACACUCCCUCUGCAG
.(.(((((..((((((((((((........(((.(((...((.......)).))))))))))))))))))))))).)..

Structure

-g a     CA            GAGCAUcc   a   cca  uu 
  g ggAGG  GGGUGUGAGCGU        cag ggc   gg  c
  | |||||  ||||||||||||        ||| |||   ||  a
  C UCUCC  CUCACACUCGCa        guc ccg   cc  a
GA G     --            --------   -   --a  ug 

Annotation confidence Not enough data

Genome context

chr2: 93421929-93422007 [-]

Mature mmu-miR-7001-5p

• Accession: MIMAT0027904
• Description: Mus musculus mmu-miR-7001-5p mature miRNA
• Sequence: 6 - AGGCAGGGUGUGAGCGUGAGCAU - 28
• Evidence: experimental ; meta-analysis [1]

Mature mmu-miR-7001-3p

• Accession: MIMAT0027905
• Description: Mus musculus mmu-miR-7001-3p mature miRNA
• Sequence: 60 - CGCUCACACUCCCUCUGCAG - 79
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645