miRBase entry: mmu-mir-7040

Stem-loop mmu-mir-7040


Accession
MI0022889
Symbol
MGI: Mir7040
Description
Mus musculus mmu-mir-7040 precursor miRNA


Sequence

23 reads, 3 reads per million, 11 experiments
ucuccCAUACGGAGGGAGAUGGAGGCGcccucagugguaacCGCCACCCUCUCUCUCACGUAG
.......((((((((((((.((.((((.((.....))....)))).)).)))))))).)))).

Structure
ucuccCA    -        U  A    ---c  u 
       UACG GAGGGAGA GG GGCG    cc c
       |||| |||||||| || ||||    || a
       AUGC CUCUCUCU CC CCGC    gg g
------G    A        C  A    caau  u 


Annotation confidence Not enough data
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Genome context
chr6: 83049711-83049773 [+]

Database links

Mature mmu-miR-7040-5p

Accession MIMAT0027984
Description Mus musculus mmu-miR-7040-5p mature miRNA
Sequence 6 - CAUACGGAGGGAGAUGGAGGCG - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-7040-3p

Accession MIMAT0027985
Description Mus musculus mmu-miR-7040-3p mature miRNA
Sequence 42 - CGCCACCCUCUCUCUCACGUAG - 63
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645