miRBase entry: mdm-MIR403b

Stem-loop mdm-MIR403b


Accession
MI0023116
Description
Malus domestica mdm-MIR403b precursor miRNA
Gene family
MIPF0000290; MIR403

Literature search
2 open access papers mention mdm-MIR403b
(9 sentences)

Sequence

gacggggcacaucuccaguuugugccugaaucaaaccccaucucagcuguccaucugucugauggcuaauccaacggugUUAGAUUCACGCACAAACUCGugaucugucuccuc
((.((((((.(((.(.(((((((((.((((((.(((.((.........(.(((((.....)))))).........)).))).)))))).))))))))).).))).)))))).))

Structure
  c      c   u c         c      a   c  aucucagcu u     u 
ga ggggca auc c aguuugugc ugaauc aac cc         g ccauc g
|| |||||| ||| | ||||||||| |||||| ||| ||         | ||||| u
cu cucugu uag G UCAAACACG ACUUAG UUg gg         c gguag c
  c      c   u C         C      A   u  caaccuaau -     u 


Annotation confidence Not enough data
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Genome context
MDC002523.549: 17325-17438 [-]

Database links

Mature mdm-miR403b

Accession MIMAT0026012
Description Malus domestica mdm-miR403b mature miRNA
Sequence 80 - UUAGAUUCACGCACAAACUCG - 100
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47