Stem-loop sequence cqu-mir-252-2

Accession

MI0023546 (change log)

Description

Culex quinquefasciatus miR-252-2 stem-loop

Gene family

MIPF0000285; mir-252

Literature search

2 open access papers mention cqu-mir-252-2
(12 sentences)

Stem-loop

   ga       ac        a u  c     agaga 
5'   auucuuu  uaaguacu g gc gcagg     u
     |||||||  |||||||| | || |||||     u
3'   ugagaag  auucguga c cg cgucc     u
   --       cu        a c  u     ccaag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CpipJ1): supercont3.975: 115583-115653 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0023546

Mature sequence cqu-miR-252-5p

• Accession: MIMAT0014373
• Previous IDs: cqu-miR-252
• Sequence: 11 - cuaaguacuagugccgcaggag - 32
• Evidence: experimental; Illumina [1]

Mature sequence cqu-miR-252-3p

• Accession: MIMAT0014374
• Previous IDs: cqu-miR-252*
• Sequence: 44 - ccugcugcccaagugcuuaucg - 65
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).