Stem-loop sequence cqu-mir-375-2

Accession

MI0023549 (change log)

Description

Culex quinquefasciatus miR-375-2 stem-loop

Gene family

MIPF0000114; mir-375

Literature search

1 open access papers mention cqu-mir-375-2
(2 sentences)

Stem-loop

   gu   uaac      au   aguu    a         u   cg      ggc   g 
5'   gcc    aggagc  ccg    acuc agccggacg aac  aaacuu   ucu c
     |||    ||||||  |||    |||| ||||||||| |||  ||||||   ||| u
3'   ugg    ucuucg  ggc    ugag ucgguuugc uug  uuugag   agg g
   -g   ---u      --   guau    c         -   --      --a   u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CpipJ1): supercont3.455: 42516-42621 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0023549

Mature sequence cqu-miR-375

• Accession: MIMAT0014443
• Sequence: 69 - uuuguucguuuggcucgaguua - 90
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).