Stem-loop ssc-mir-7136

Accession

MI0023569

Description

Sus scrofa ssc-mir-7136 precursor miRNA

Literature search

1 open access papers mention ssc-mir-7136
(3 sentences)

Sequence

1 reads, 4 reads per million, 1 experiments

UCUGGUCCAGACACUGUGGAGCugaagagaccaacacuUCUCAGUGUUUGAACCAGAAGC
((((((.(((((((((.((((.((..........)))))).))))))))).))))))...

Structure

---      C         U    C  aaga 
   UCUGGU CAGACACUG GGAG ug    g
   |||||| ||||||||| |||| ||     
   AGACCA GUUUGUGAC CUuc ac    a
CGA      A         U    -  aacc 

Annotation confidence Not enough data

Genome context

chr7: 8701439-8701498 [+]

Mature ssc-miR-7136-5p

• Accession: MIMAT0028147
• Description: Sus scrofa ssc-miR-7136-5p mature miRNA
• Sequence: 1 - UCUGGUCCAGACACUGUGGAGC - 22
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-7136-3p

• Accession: MIMAT0028148
• Description: Sus scrofa ssc-miR-7136-3p mature miRNA
• Sequence: 39 - UCUCAGUGUUUGAACCAGAAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22953717
   Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
   Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
   BMC Genomics (2012) 13:459