miRBase entry: mes-MIR166g

Stem-loop mes-MIR166g


Accession
MI0024240
Description
Manihot esculenta mes-MIR166g precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
6 open access papers mention mes-MIR166g
(16 sentences)

Sequence

uugaggggaauguugucuggcucgaggccacuaacuagaucuguaauuuuuaucucugaauuuguauugagauaugauugaugaucaugaguuagugacgUCGGACCAGGCUUCAUUCCCCccaa
.((.((((((((..((((((.((((.(.((((((((.((((..(((((..((((((............)))))).)))))..))))...)))))))).).)))).))))))..)))))))).)).

Structure
u  a        uu      c    g c        --a    ug     uu      ugaau 
 ug ggggaaug  gucugg ucga g cacuaacu   gauc  uaauu  uaucuc     u
 || ||||||||  |||||| |||| | ||||||||   ||||  |||||  ||||||      
 ac CCCCUUAC  CGGACC GGCU c gugauuga   cuag  guuag  auagag     u
a  c        UU      A    g a        gua    ua     -u      uuaug 


Annotation confidence Not enough data
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Genome context
scaffold00872: 85496-85620 [-]

Database links

Mature mes-miR166g

Accession MIMAT0029198
Description Manihot esculenta mes-miR166g mature miRNA
Sequence 101 - UCGGACCAGGCUUCAUUCCCC - 121
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269