Stem-loop sequence mes-MIR166j

AccessionMI0024243 (change log)
DescriptionManihot esculenta miR166j stem-loop
Gene family MIPF0000004; MIR166
Literature search

6 open access papers mention mes-MIR166j
(19 sentences)

Stem-loop
   u           uu         a   ucau  g      -  ug uca 
5'  ugaggggaaug  gucugguuc agg    gu aagcua cu  g   u
    |||||||||||  ||||||||| |||    || |||||| ||  |    
3'  acucuccuuac  cggaccagg ucc    ua uuugau ga  u   c
   a           uu         c   --uc  g      c  uu uuu 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Cassava4) Overlapping transcripts
scaffold02895: 16886-16982 [-]
intergenic
Database links

Mature sequence mes-miR166j

Accession MIMAT0029201
Sequence

73 - 

ucggaccaggcuucauucc

 - 91

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Evidence experimental; Illumina [2]

References

1
PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).
2
PMID:26822616 "High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs" Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN BMC Genomics. 17:85(2016).