Stem-loop mes-MIR171h

Accession

MI0024286

Description

Manihot esculenta mes-MIR171h precursor miRNA

Literature search

7 open access papers mention mes-MIR171h
(16 sentences)

Sequence

uugaaagugccauugugauguuggcucgguucacucagacaaauuacuauguuuuacuacaagcauguuauggucuuUGAUUGAGCCGUGCCAAUAUCuuagugcucuuucaa
.((((((.((.((((.(((((((((.(((((((.((((((.....((.((((((......))))))))....)))..))).))))))).))))))))).)))))).)))))).

Structure

u      u  c    u         u       c   --   aaauu  u      ua 
 ugaaag gc auug gauguuggc cgguuca uca  gac     ac auguuu  c
 |||||| || |||| ||||||||| ||||||| |||  |||     || ||||||   
 acuuuc cg ugau CUAUAACCG GCCGAGU AGU  cug     ug uacgaa  u
a      u  -    u         U       U   uu   -guau  -      ca 

Annotation confidence Not enough data

Genome context

scaffold09683: 88279-88391 [-]

Mature mes-miR171h

• Accession: MIMAT0029244
• Description: Manihot esculenta mes-miR171h mature miRNA
• Sequence: 78 - UGAUUGAGCCGUGCCAAUAUC - 98
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269