Stem-loop sequence mes-MIR477h

Accession

MI0024330 (change log)

Description

Manihot esculenta miR477h stem-loop

Literature search

3 open access papers mention mes-MIR477h
(6 sentences)

Stem-loop

         au                  caa   c       agcca    c      cauucucuuucaug 
5' aaggca  ucgcguuuaacucucccu   ggg uucagcu     acgu ccuuug              a
   ||||||  ||||||||||||||||||   ||| |||||||     |||| ||||||              g
3' uuccgu  agcgcagguugagggggg   ccc aaguuga     ugca ggagac              a
         cc                  cgg   u       aauug    a      acguaguagcgguc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold08265: 457959-458101 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024330

Mature sequence mes-miR477h

• Accession: MIMAT0029288
• Sequence: 18 - acucucccucaagggcuucag - 38
• Evidence: not experimental

References

1. PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).