Stem-loop mes-MIR477h

Accession

MI0024330

Description

Manihot esculenta mes-MIR477h precursor miRNA

Literature search

3 open access papers mention mes-MIR477h
(6 sentences)

Sequence

aaggcaauucgcguuuaACUCUCCCUCAAGGGCUUCAGcuagccaacgucccuuugcauucucuuucaugagacuggcgaugaugcacagaggaacguguuaaaguugaaucccggcggggggaguuggacgcgaccugccuu
((((((..((((((((((((((((((...(((.(((((((.....((((.((((((((.((((......)))).))((......)).)))))).)))).....))))))).)))...))))))))))))))))))..))))))

Structure

      au                  CAA   C       agcca    c      -----------  u    uu 
aaggca  ucgcguuuaACUCUCCCU   GGG UUCAGcu     acgu ccuuug           ca ucuc  u
||||||  ||||||||||||||||||   ||| |||||||     |||| ||||||           || ||||   
uuccgu  agcgcagguugagggggg   ccc aaguuga     ugca ggagac           gu agag  c
      cc                  cgg   u       aauug    a      acguaguagcg  c    ua 

Annotation confidence Low

Genome context

scaffold08265: 457959-458101 [-]

Mature mes-miR477h

• Accession: MIMAT0029288
• Description: Manihot esculenta mes-miR477h mature miRNA
• Sequence: 18 - ACUCUCCCUCAAGGGCUUCAG - 38
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269