miRBase entry: mes-MIR827

Stem-loop mes-MIR827


Accession
MI0024344
Description
Manihot esculenta mes-MIR827 precursor miRNA
Gene family
MIPF0001785; MIR827_4

Literature search
1 open access papers mention mes-MIR827
(1 sentences)

Sequence

cauggauauauuuguugauagucaucuacucaauuuauuuuuaacccauuaauuauuaugaUUAGAUGACCAUCAACAAACAcauucaug
(((((((...(((((((((.((((((((.(((....((..((((....))))..))..))).)))))))).)))))))))...)))))))

Structure
       aua         a        c   auuu  uu    c 
cauggau   uuuguugau gucaucua uca    au  uuaa c
|||||||   ||||||||| |||||||| |||    ||  ||||  
guacuua   AAACAACUA CAGUAGAU agu    ua  aauu c
       cAC         C        U   --au  uu    a 


Annotation confidence Not enough data
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Genome context
scaffold04024: 220009-220098 [+]

Database links

Mature mes-miR827

Accession MIMAT0029302
Description Manihot esculenta mes-miR827 mature miRNA
Sequence 62 - UUAGAUGACCAUCAACAAACA - 82
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269