miRBase entry: mtr-MIR2656e

Stem-loop mtr-MIR2656e


Accession
MI0025209
Description
Medicago truncatula mtr-MIR2656e precursor miRNA
Gene family
MIPF0000976; MIR2656


Sequence

acaugcauauaagaggucuAAGUUGCAUAAUCGAGUUGGagucacauuugucgagucaaggauguuuaaguugauaaguugugaaguuguaauuguuuauacaaacuaugauugaagugcuaaauga
....((((......((((..(((((.((((.(((....((.(((((((((((((.(.(((....))).).)))))))).)))))..))....))).)))).).))))..))))...)))).......

Structure
---acau    auaaga    uA    - C    U   GUUG  -g     -        g c   g 
       gcau      gguc  AGUU G AUAA CGA    Ga  ucaca uuugucga u aag a
       ||||      ||||  |||| | |||| |||    ||  ||||| |||||||| | |||  
       cgug      uuag  ucaa c uauu guu    uu  agugu gaauaguu a uuu u
aguaaau    ---aag    ua    a a    u   aaug  ga     u        g a   g 


Annotation confidence Not enough data
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Genome context
chr7: 12367058-12367184 [+]

Database links

Mature mtr-miR2656e

Accession MIMAT0029969
Description Medicago truncatula mtr-miR2656e mature miRNA
Sequence 20 - AAGUUGCAUAAUCGAGUUGG - 39
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796