miRBase entry: mtr-MIR2669b

Stem-loop mtr-MIR2669b


Accession
MI0025217
Description
Medicago truncatula mtr-MIR2669b precursor miRNA
Gene family
MIPF0001781; MIR2669


Sequence

auggugaaauuaugagaaugacuuuucuggugaagucaacacuauaguauuaaaaguguagugaguagcaccccacuguuuauAAAGUUCAGUCUUCAUAGUAUCaucaa
.((((((.((((((((..(((((((......))))))).(((((((.(......).)))))))...........((((...........)))).)))))))).)))))).

Structure
a      a        aaugacuuuucuggugaagucaacacuauaguauuaaaaguguagugaguagcacccc    uuua 
 ugguga auuaugag                                                          acug    u
 |||||| ||||||||                                                          ||||    A
 acuaCU UGAUACUU                                                          UGAC    A
a      A        ---------------------------------------------------------C    UUGA 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 22248078-22248187 [+]

Database links

Mature mtr-miR2669b

Accession MIMAT0029977
Description Medicago truncatula mtr-miR2669b mature miRNA
Sequence 84 - AAAGUUCAGUCUUCAUAGUAUC - 105
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796