Stem-loop ath-MIR8181

Accession

MI0026811

Description

Arabidopsis thaliana ath-MIR8181 precursor miRNA

Sequence

UGGGGGUGGGGGGGUGACAGagacauucuucauucguaugcucaugaugacgucagcacggguucaugguuugugggucuugauguuaagcauguagaugaaggaaaguuuugcuguucugcgugguccuca
(((((((.(.(.((.(((((((((.(((((((((..((((((.....((((((((....((((((((.....))))))))))))))))))))))..)))))))))..))))..))))))).).).)))))))

Structure

       G G G  U     --    -a         cg      cauga        gcac        g 
UGGGGGU G G GG GACAG  agac  uucuucauu  uaugcu     ugacguca    ggguucau g
||||||| | | || |||||  ||||  |||||||||  ||||||     ||||||||    |||||||| u
acuccug u c uc uuguc  uuug  aggaaguag  guacga     auuguagu    ucugggug u
       g g g  -     gu    aa         au      -----        ----        u 

Annotation confidence Not enough data

Genome context

chr5: 21641177-21641308 [-]

Mature ath-miR8181

• Accession: MIMAT0032780
• Description: Arabidopsis thaliana ath-miR8181 mature miRNA
• Sequence: 1 - UGGGGGUGGGGGGGUGACAG - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119003
   Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
   Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
   BMC Genomics (2013) 14:701