Stem-loop sma-mir-8408

Accession

MI0027201

Description

Schistosoma mansoni sma-mir-8408 precursor miRNA

Sequence

gagucauguucauaaaagugaaaugauuacucauuuuauaaccuacgUAAUUAUAUUAUACUAUAUAuauauuauuauuauuauaccucauuauauuuuaacaaaacauuaucUUUAGUUCUAAUAUGAAUAUuucaggucauucauaaguaauaccacuugugaacauuau
.((((((.(((((....)))))))))))............((((..(((.((((((((.((((...(((........(((..(((........)))..)))........)))...))))..)))))))).)))...))))..(((((((((......)))))))))......

Structure

gagucauguucauaaaagugaaaugauuacucauuuuaua    -ac   A        -U    UAU   uauuauua   uu   ccu 
                                        accu   gUA UUAUAUUA  ACUA   Aua        uua  aua   c
                                        ||||   ||| ||||||||  ||||   |||        |||  |||    
                                        ugga   UAU AGUAUAAU  UGAU   uau        aau  uau   a
--------uauuacaaguguucaccauaaugaauacuuac    cuu   A        CU    UUc   uacaaaac   uu   auu 

Annotation confidence Not enough data

Genome context

Chr_1: 1566787-1566958 [+]

Mature sma-miR-8408-5p

• Accession: MIMAT0033520
• Description: Schistosoma mansoni sma-miR-8408-5p mature miRNA
• Sequence: 48 - UAAUUAUAUUAUACUAUAUA - 67
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8408-3p

• Accession: MIMAT0033521
• Description: Schistosoma mansoni sma-miR-8408-3p mature miRNA
• Sequence: 114 - UUUAGUUCUAAUAUGAAUAU - 133
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402