Stem-loop sma-mir-8431

Accession

MI0027224

Description

Schistosoma mansoni sma-mir-8431 precursor miRNA

Sequence

caaaucaauucuuucagcugcucauuaagaagggacuuaagauuacGUUCUUAAUGUUGUAUUAGUUacgaugucuuuaauggUAAUUUGAUGUUAUUAAGGcgugcauauaauuugucucaaaucuuaaauaugauuguuauugaaaaguuguacau
.....(((((.((((((..(((((((((((.(((((.....(((((((.(((((((...((((((((((.((.......)).)))).)))))).)))))))))))).)).......)))))...)))))...))))..))..))))))))))).....

Structure

caaau     c      cu  --    ---     --a     --uuaag  -     U       UUG      -    g  gu 
     caauu uuucag  gc  ucau   uaaga   gggac       au uacGU CUUAAUG   UAUUAG UUac au  c
     ||||| ||||||  ||  ||||   |||||   |||||       || ||||| |||||||   |||||| |||| ||  u
     guuga aaaguu  ug  agua   auucu   cucug       ua gugcG GAAUUAU   GUAGUU AAUg ua  u
uacau     -      au  uu    uaa     aaa     uuuaaua  c     -       --U      U    g  au 

Annotation confidence Not enough data

Genome context

Chr_3: 12489943-12490100 [-]

Mature sma-miR-8431-5p

• Accession: MIMAT0033566
• Description: Schistosoma mansoni sma-miR-8431-5p mature miRNA
• Sequence: 47 - GUUCUUAAUGUUGUAUUAGUU - 67
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8431-3p

• Accession: MIMAT0033567
• Description: Schistosoma mansoni sma-miR-8431-3p mature miRNA
• Sequence: 84 - UAAUUUGAUGUUAUUAAGG - 102
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402