Stem-loop sma-mir-8436

Accession

MI0027229

Description

Schistosoma mansoni sma-mir-8436 precursor miRNA

Sequence

ugaauugaaacuaagaaagcaguuaauuuuauugAUAUGUCAGAUUGUUCUAUUcagugagauguaaugaaaugucguuaauucugagccgAAUUUGGAUAUUUUUAUUCcguaaagaaauaauacugcuuuuugugucacucuu
.........((..((((((((((..(((((.(((....((.(((.(((((.((((.((.(((..((((((....))))))..)))..)).))))..))))).))).))....))).)))))...))))))))))..)).......

Structure

ugaauugaa  ua          -ua     a   AUAU  C   U     -U    a  -g   ug      a 
         ac  agaaagcagu   auuuu uug    GU AGA UGUUC  AUUc gu  aga  uaauga a
         ||  ||||||||||   ||||| |||    || ||| |||||  |||| ||  |||  ||||||  
         ug  uuuuucguca   uaaag aau    UA UUU AUAGG  UAAg cg  ucu  auugcu u
--uucucac  ug          uaa     a   gcCU  U   U     UU    c  ag   ua      g 

Annotation confidence Not enough data

Genome context

Chr_3: 6273151-6273295 [+]

Mature sma-miR-8436-5p

• Accession: MIMAT0033576
• Description: Schistosoma mansoni sma-miR-8436-5p mature miRNA
• Sequence: 35 - AUAUGUCAGAUUGUUCUAUU - 54
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8436-3p

• Accession: MIMAT0033577
• Description: Schistosoma mansoni sma-miR-8436-3p mature miRNA
• Sequence: 92 - AAUUUGGAUAUUUUUAUUC - 110
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402