Stem-loop sma-mir-745

Accession

MI0027235

Description

Schistosoma mansoni sma-mir-745 precursor miRNA

Sequence

aaauuucaucauuuacuucUCGGUUCUUACCAGGCAAGACAUguucaucauauuuuuuguauuacaaaaauacaUGCUGCCUGAUAAGAGCUGUGaacaaguaugauugaucuuc
.....(((((((....(((.(((((((((.((((((.(.(((((.........(((((((...))))))).)))))))))))).))))))))).))).....)))).))).....

Structure

aaauu   -    -uuac   U         C      A A     ucaucauau       a 
     uca ucau     uuc CGGUUCUUA CAGGCA G CAUgu         uuuuugu  
     ||| ||||     ||| ||||||||| |||||| | |||||         ||||||| u
     agu agua     aaG GUCGAGAAU GUCCGU C GUaca         aaaaaca  
cuucu   u    ugaac   U         A      - -     --------u       u 

Annotation confidence Not enough data

Genome context

Chr_4: 15609927-15610041 [-]

Mature sma-miR-745-5p

• Accession: MIMAT0033588
• Description: Schistosoma mansoni sma-miR-745-5p mature miRNA
• Sequence: 20 - UCGGUUCUUACCAGGCAAGACAU - 42
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-745-3p

• Accession: MIMAT0033589
• Description: Schistosoma mansoni sma-miR-745-3p mature miRNA
• Sequence: 75 - UGCUGCCUGAUAAGAGCUGUG - 95
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402